How does Euk translation mechanism differ from Prok at initiation? Euk mRNAs are processed prior to translation The primary enzyme involved in translation The ribosome, which functions as a ribozyme Enzyme which catalyzes the peptide bond pepitdyl transferase Named subsections of a tRNA 3 loops: D loop, anticodon loop (interacts with mRNA), T-Psi loop Where the amino acid attaches to the tRNA The 3'-OH; a universally conserved CCA sequence at the 3' end Prok ribosome is composed of these 50S and 30S subunits Euk ribosome is composed of these 60S and 40S subunits The three tRNA binding sites on a ribosome A-site: aminoacyl site, decoding site for incoming mRNA; P-site: peptidyl site, holds the nascent peptide chain; E-site: holds deacylated tRNA before leaving the ribosome Prok translation initiation: three initiation factors IF-1: blocks A-site; IF-2: promotes tRNA binding to P-site; IF-3: prevents association of large subunit Prok translation initiation: unique method mRNA binds via Shine-Dalgarno sequence; base-pairing between mRNA and rRNA; allows internal initation and polycistronic mRNAs Euk translation initiation notes Scanning ribosome; small subunit recognizes 5' cap; many initiation factors; scan from cap to first AUG; no polycistronic mRNA; cannot initiate internally. This delivers tRNA to A-site EF-Tu-GTP tRNAs must decode mRNA here A site Ribosome translocates with this EF-G-GTP Termination notes When stop codon is in A site, no decoding; Termination factor (release factor) binds; completed peptide is hydrolyzed from tRNA; ribosomal subunits separate; ribosome reinitiates on a new mRNA